学術論文・総説(欧文)
【2020年】
Hayashi N and Oki M. (2020)
Altered metabolic regulation owing to gsp1 mutations encoding the nuclear small G protein in
Saccharomyces cerevisiae.
Curr Genet. 66 (2), 335-344.
-
【2019年】
-
Kanada F, Ogino Y, Yoshida T, Oki M. (2019) A novel tracking and analysis system for
time-lapse cell imaging of Saccharomyces cerevisiae.Genes Genet. Syst., in press
Kanada F, Takamura Y, Miyake S, Kamata K, Inami M, Inatani M, Oki M. (2019)
Histone acetyltransferase and Polo-like kinase3 inhibitors prevent rat galactose-induced cataract.
Sci. Rep., Dec 27;9(1):20085. -
- Hamdani O, Dhillon N, Hsieh TS, Fujita T, Ocampo J, Kirkland JG, Lawrimore J,
Kobayashi TJ, Friedman B, Fulton D, Wu KY, Chereji RV, Oki M, Bloom K, Clark DJ, Rando OJ, Kamakaka RT. (2019)
tRNA Genes Affect Chromosome Structure and Function via Local Effects.
Mol. Cell. Biol., in press PMID:30718362 - Doubayashi D, Oki M, Mikami B, Uchida H. (2019)
The microenvironment surrounding FAD mediates its conversion to 8-formyl-FAD in Aspergillus oryzae RIB40 formate oxidase.
J. Biochem., in press PMID:30715389
- Uchida H, Mikami B, Yamane-Tanabe A, Ito A, Hirano K, Oki M. (2018)
Crystal structure of an aldehyde oxidase from Methylobacillus sp. KY4400.
J. Biochem., 163 (4), 321-328. PMID: 29319807
- Aihara H, Nakagawa T, Mizusaki H, Yoneda M, Kato M, Doiguchi M, Imamura Y, Higashi
M, Ikura T, Hayashi T, Kodama Y, Oki M, Nakayama T, Cheung E, Aburatani H, Takayama
KI, Koseki H, Inoue S, Takeshima Y, Ito T. (2016) Histone H2A T120 Phosphorylation
Promotes Oncogenic Transformation via Upregulation of Cyclin D1.
Mol Cell. 64(1), 176-188. PMID: 27716482 - Kamata K, Shinmyozu K, Nakayama JI, Hatashita M, Uchida H, Oki M. (2016)
Four domains of Ada1 form a heterochromatin boundary through different mechanisms.
Genes Cells. 21(10), 1125-1136. PMID: 27647735 - Mitsumori R, Shinmyozu K, Nakayama J, Uchida H and Oki M. (2016)
Gic1 is a novel heterochromatin boundary protein in vivo.
Genes Genet. Syst., 91(3):151-159. PMID: 27301280 - Mitsumori R*, Ohashi T*, Kazuto K, Ichino A, Kei Taniguchi, Kunihiro Ohta, Uchida H
and Oki M. (2016)
Analysis of novel Sir3 binding regions in Saccharomyces cerevisiae.
J. Biochem., 160 (1), 11-17. PMID: 26957548
*These two authors contributed equally to this work.
- Kamata K*, Goswami G*, Kashio S, Urano T, Nakagawa R, Uchida H and Oki M.(2014) The N-terminus and Tudor domains of Sgf29 are important for its heterochromatin boundary formation function
J. Biochem., 155 (3), 159-171.
*These two authors contributed equally to this work.
- Kamata K∗, Hatanaka A∗, Goswami G, Shinmyozu K, Nakayama J, Urano T, Hatashita M, Uchida H and Oki M. (2013) The C-terminus of the Sgf73 subunit of SAGA and SLIK is important for retention in the larger complex and for heterochromatin boundary function.
Genes to cells, 18(9), 823-837. PMID: 23819448
∗These two authors contributed equally to this work. - Mano Y, Kobayashi TJ, Nakayama J, Uchida H and Oki M.(2013) Single cell visualization of yeast gene expression shows correlation of epigenetic switching between multiple heterochromatic regions through multiple generations.
PLOS Biology, Jul;11(7):e1001601. PMID: 23843746
-
Hatanaka A, Chen B, Sun JQ, Mano Y, Funakoshi M, Kobayashi H, Ju Y, Mizutani T,
Shinmyozu K, Nakayama J, Miyamoto K, Uchida H and Oki M. (2011)
Fub1, a novel protein isolated by boundary screening, binds the proteasome complex.
Genes Genet. Syst., 86, 305-314. PMID: 22362029 - Doubayashi D, Ootake T, Maeda Y, Oki M, Tokunaga Y, Sakurai A, Nagaosa Y, Mikami
B, Uchida H. (2011) Formate oxidase, an enzyme of the glucose-methanol-choline
oxidoreductase family, has His-Arg pair and 8-formyl-FAD in catalytic site.
Biosci. Biotechnol. Biochem., 75, 1662-1667. PMID: 21897046 -
Sun JQ, Hatanaka A and Oki M. (2011)
Boundaries of transcriptionally silent chromatin in Saccharomuces cerevisiae.
Genes Genet. Syst., 86, 73-81. (Review) PMID: 21670546
-
Maeda Y, Dobayashi D, Ootake T, Oki M, Mikami B and Uchida H. (2010)
Crystallization and preliminary X-ray analysis of formate oxidase, an enzyme of the glucose-methanol-choline oxidoreductase family.
Acta. Crystallogr. Sect. F. Struct. Biol. Cryst. Commun.,66, 1064-1066.
PMID: 20823527 -
Mizutani T, Yazawa T, Ju Y, Imamichi Y, Uesaka M, Inaoka Y, Matsuura K, Kamiki Y, Oki M , Umezawa A and Miyamot K. (2010)
Identification of a novel distal control region upstream of the human steroidogenic acute regulatory protein (STAR) gene that participates in SF-1 dependent chromatin architecture.
J. Biol Chem. 285, 28240-28251. PMID: 20601698
- Maeda Y, Dobayashi D, Oki M, Nose H, Sakurai A, Isa K, Fujii Y and Uchida H. (2009)
Expression in Escherichia coli of an unnamed protein gene from Aspergillus oryzae Aspergillus oryzae RIB40 and cofactor analyses of the gene product as formate oxidase.
Biosci. Biotechnol. Biochem. 732645-2649. PMID: 19966484
- Maeda Y, Oki M, Fujii Y, Hatanaka A, Hojo M, Hirano K and Uchida H. (2008)
Cloning and expression of three formate oxidase genes from Debaryomyces vanrijiae MH201.
Biosci. Biotechnol. Biochem.,72, 1999-2004. PMID: 18685206
- Oki M, Ma L, Wang Y, Hatanaka A, Miyazato C, Tatebayashi K, Nishitani H, Uchida H and Nishimoto T. (2007)
Identification of novel suppressors for Mog1 implies its involvement in RNA metabolism, lipid metabolism and signal transduction.
Gene, 400, 114-121. PMID: 17651922
- Oki M, Aihara H and Ito T. (2007)
Role of histone phosphorylation in chromatin dynamics and its implications in diseases.
Subcell Biochem., 41, 319-336. (Review) PMID: 17484134 - Hayashi N, Murakami S, Tsurusaki S, Nagaura Z, Oki M, Nishitani H, Kobayashi M, Shimizu H, Yamamoto K and Nishimoto T. (2007)
Temperature-sensitive defects of the GSP1 gene, yeast Ran homologue, activeate the Tel1-dependent pathway.
Biochem.Biophys.Res.Commun., 355, 330-336. PMID: 17187759
- Valencia-Burton M, Oki M, Johnson J, Seier TA, Kamakaka RT and Haber JE. (2006)
Different mating-type-regulated genes affect the DNA repair defects of Saccharomyces RAD51, RAD52 and RAD55 mutants.
Genetics, 174, 41-55. PMID: 16782999
- Dhillon N, Oki M, Szyjka SJ, Aparicio OM and Kamakaka RT. (2006)
H2A.Z functions to regulate progression through the cell cycle.
Mol. Cell. Biol., 26, 489-501. PMID: 16382141
- Oki M and Kamakaka RT. (2005)
Barrier function at HMR.
Mol. Cell, 19, 707-716. PMID: 16137626
- Oki M, Valenzuela L, Chiba T, Ito T and Kamakaka RT. (2004)
Barrier proteins remodel and modify chromatin to restrict silenced domains.
Mol. Cell. Biol., 24, 1956-1967. PMID: 14966276
- Oki M and Kamakaka RT. (2002)
Blockers and barriers to transcription : competing activities.
Curr. Opin. Cell. Biol., 14, 299-304. (Review) PMID: 12067651
- Suzuki N, Noguchi E, Nakashima N, Oki M, Ohba T, Tartakoff A, Ohishi M, and Nishimoto T. (2001)
The Saccharomyces cerevisiae small GTPase, Gsp1p/Ran , is involved in 3' processing of 7S-to-5.8S rRNA and in degradation of the excised 5'-A0 fragment of 35S pre-rRNA, both of which are carried out by the exosome.
Genetics, 158, 613-625. PMID: 11404326
- Oki M and Nishimoto T. (2000).
Yrb1p interaction with the Gsp1p C terminus blocks Mog1p stimulation of GTP release from Gsp1p.
J. Biol Chem., 275, 32894-32900. PMID: 10921930
- Oki M and Nishimoto T. (1998).
A protein required for nuclear-protein import, Mog1p, directly interacts with GTP-Gsp1p, the Saccharomyces cerevisiae Ran homologue.
Proc. Natl. Acad. Sci. USA, 95, 15388-15393. PMID: 9860978 - Oki M, Noguchi E, Hayashi N, Nishimoto T. (1998)
Nuclear protein import, but not mRNA export, is defective in all Saccharomyces cerevisiae mutants that produce temperature-sensitive forms of the Ran GTPase homologue Gsp1p.
Mol. Gen. Genet., 257, 624-634. PMID: 9604885
- Kakikawa M, Watanabe N, Funawatashi T, Oki M, Yasukawa H, Taketo A, Kodaira K. (1998).
Promoter/repressor system in Lactobacillus plantarum phage Φg1e:characterization of the promoter pR49-pR-pL and overproduction of the cro-like protein Cng in Eschrichia coli.
Gene, 215, 371-379. PMID: 9714836
- Oki M, Kakikawa M, Nakamura S, Yamamura E, Watanabe N, Sasamoto M, Taketo A, Kodaira K. (1997)
Fanctional and structural features of the holin HOL protein of the Lactobacillus plantarum phage Φg1e: analysis in Escherishia coli system.
Gene, 197, 137-145
- Kodaira K, Oki M, Kakikawa M, Watanabe N, Hirakawa M, Yamada K, Taketo A. (1997)
Genome structure of the Lactobacillus temperate phage Φg1e: the whole genome sequence and the putative promoter/repressor system.
Gene, 187, 45-53. PMID: 9332359
- Kakikawa M, Oki M, Watanabe N, Yasukawa H, Masamune Y, Taketo A, Kodaira K. (1997)
Characterization of the genes encoding integrative and excisive functions of Lactobacillus phage Φg1e: clonig,sequence analysis, and expression in Escherishia coli .
Gene, 185, 119-125. PMID: 9034322
- Oki M, Kakikawa M, Taketo A, Kodaira K. (1996)
Cloning, sequence analysis, and expression of the genes encoding lytic functions of Lactobacillus bacteriophage Φg1e.
Gene, 176, 215-223. PMID: 8918256
- Oki M, Kakikawa M, Taketo A, Kodaira K. (1996)
Genome structure of a Lactobacillus plasmid pNMO belonging to the rolling-circle type replicon.
J. Gen. Appl. Microbiol., 42, 271-283
- Kodaira K, Oki M, Kakikawa M, Taketo A. (1996)
The virion proteins encoded by bacteriophage fK and its host-range mutant ΦKhT:host-range determination and DNA binding properties.
J. Biochem., 119, 1062-1069. PMID: 8827438
- Kakikawa M, Oki M, Tadokoro H, Nakamura S, Taketo A, Kodaira K. (1996)
Cloning and nucleotido sequence of the major capsid protein of Lactobacillus bacteriophage Φg1e.
Gene, 175, 157-165. PMID: 8917093
- Kodaira K, Oki M, Taketo A, Yasukawa H, Masamune Y. (1995)
Determination of the single stranded origin of Shigella sonnei plasmid pKYM.
Biochimica et Biophysica Acta., 1260, 183-190. PMID: 7841195
学術論文・総説(邦文)
- 田頭英樹、中川武弥、沖昌也、安井潔、伊藤敬 (2005)
p62-72 バイオ研究マスターシリーズ、転写研究集中マスター
「クロマチンリモデリング」 - 中川武弥、 田頭英樹、沖昌也、伊藤敬 (2005)
vol 42, No.9, p966-972 Molecular Medicine, 転写制御と疾患 「クロマチンと病態」